SHOGoiN Cell Transcriptome: GSM1677597

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677597


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T125The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 133.4766
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 120.8382
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 50.2873
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.9981
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 38.9424
6 ENSG00000184009 ACTG1 actin gamma 1 38.8434
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.2667
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 30.4882
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 29.7490
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 28.7327

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277103 NA -0.1081
57166 ENSG00000277099 NA -0.1081
57164 ENSG00000277096 NA -0.1081
57163 ENSG00000277095 NA -0.1081
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 28.7327
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 29.7490
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 30.4882
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.2667
6 ENSG00000184009 ACTG1 actin gamma 1 38.8434
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 38.9424

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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