SHOGoiN Cell Transcriptome: GSM1677599

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677599


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T127The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 135.2255
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 83.7728
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 57.8875
4 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.5475
5 ENSG00000184009 ACTG1 actin gamma 1 32.6307
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 30.2203
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.1612
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 29.6510
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 29.3479
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.9264

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277073 MIR6131 microRNA 6131 -0.1308
57169 ENSG00000277066 NA -0.1308
57167 ENSG00000277063 MIR8084 microRNA 8084 -0.1308
57166 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1308
57164 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1308
57163 ENSG00000277057 MIR6779 microRNA 6779 -0.1308
57162 ENSG00000277056 NA -0.1308
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.9264
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 29.3479
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 29.6510

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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