SHOGoiN Cell Transcriptome: GSM1684383

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1684383


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T29Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 129.1132
3 ENSMUSG00000075014 Gm10800 predicted gene 10800 80.8254
4 ENSMUSG00000097554 Gm26825 predicted gene, 26825 70.8905
5 ENSMUSG00000106106 NA 67.3688
6 ENSMUSG00000058174 Gm5148 predicted gene 5148 47.7590
7 ENSMUSG00000064352 mt-Ts1 mitochondrially encoded tRNA serine 1 38.8509
8 ENSMUSG00000097154 Gm26510 predicted gene, 26510 18.4165
9 ENSMUSG00000095280 Gm21738 predicted gene, 21738 15.8638
10 ENSMUSG00000026575 Nme7 NME/NM23 family member 7 12.0060
46615 ENSMUSG00000108225 Gm43926 predicted gene, 43926 -0.0430

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108237 Gm19757 predicted gene, 19757 -0.0430
46623 ENSMUSG00000108236 0610033M10Rik RIKEN cDNA 0610033M10 gene -0.0430
46622 ENSMUSG00000108235 Gm44248 predicted gene, 44248 -0.0430
46621 ENSMUSG00000108234 Gm44428 predicted gene, 44428 -0.0430
46620 ENSMUSG00000108232 Gm43916 predicted gene, 43916 -0.0430
46619 ENSMUSG00000108231 Gm4045 predicted gene 4045 -0.0430
46618 ENSMUSG00000108230 Gm3549 predicted gene 3549 -0.0430
46617 ENSMUSG00000108229 1700102F20Rik RIKEN cDNA 1700102F20 gene -0.0430
46616 ENSMUSG00000108226 Gm44063 predicted gene, 44063 -0.0430
46615 ENSMUSG00000108225 Gm43926 predicted gene, 43926 -0.0430

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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