SHOGoiN Cell Transcriptome: GSM1684383

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1684383


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T29Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 193.1924
2 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 105.1747
3 ENSMUSG00000022026 Olfm4 olfactomedin 4 34.8224
4 ENSMUSG00000097554 Gm26825 predicted gene, 26825 31.3512
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 24.2185
6 ENSMUSG00000075015 Gm10801 predicted gene 10801 19.5109
7 ENSMUSG00000106106 18s RNA, related sequence 5 16.8005
8 ENSMUSG00000030319 Cand2 cullin-associated and neddylation-dissociated 2 (putative) 15.5166
9 ENSMUSG00000058174 Gm5148 predicted gene 5148 14.5180
10 ENSMUSG00000097461 Gm26735 predicted gene, 26735 13.6621

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0327
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0327
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0327
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0327
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0327
54519 ENSMUSG00000117327 NA -0.0327
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0327
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0327
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0327
54515 ENSMUSG00000117323 novel transcript -0.0327

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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