SHOGoiN Cell Transcriptome: GSM1684383

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1684383


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T29Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 180.3506
2 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 99.3506
3 ENSMUSG00000097554 Gm26825 predicted gene, 26825 29.3416
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 22.6804
6 ENSMUSG00000075015 Gm10801 predicted gene 10801 18.0398
7 ENSMUSG00000106106 18s RNA, related sequence 5 15.7750
8 ENSMUSG00000030319 Cand2 cullin-associated and neddylation-dissociated 2 (putative) 14.5982
9 ENSMUSG00000058174 Gm5148 predicted gene 5148 13.5990
10 ENSMUSG00000097461 Gm26735 predicted gene, 26735 13.0217
46589 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.0342

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46598 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.0342
46597 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0342
46596 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0342
46595 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0342
46594 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0342
46593 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0342
46592 ENSMUSG00000108306 Gm44640 predicted gene 44640 -0.0342
46591 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.0342
46590 ENSMUSG00000108304 Gm4607 predicted gene 4607 -0.0342
46589 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.0342

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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