SHOGoiN Cell Transcriptome: GSM1684384

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1684384


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T30Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000097554 Gm26825 predicted gene, 26825 139.9156
2 ENSMUSG00000058174 Gm5148 predicted gene 5148 109.7349
3 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 83.6137
4 ENSMUSG00000049521 Cdc42ep1 CDC42 effector protein (Rho GTPase binding) 1 50.5502
5 ENSMUSG00000043633 Fam221b family with sequence similarity 221, member B 35.1952
6 ENSMUSG00000034377 Tulp4 tubby like protein 4 34.3715
7 ENSMUSG00000097445 Gm26631 predicted gene, 26631 29.4885
8 ENSMUSG00000006649 Nphs1 nephrosis 1, nephrin 29.1355
9 ENSMUSG00000056880 Gadl1 glutamate decarboxylase-like 1 28.6060
10 ENSMUSG00000030126 Tmcc1 transmembrane and coiled coil domains 1 27.0764

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0450
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0450
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0450
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0450
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0450
54519 ENSMUSG00000117327 NA -0.0450
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0450
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0450
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0450
54515 ENSMUSG00000117323 novel transcript -0.0450

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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