SHOGoiN Cell Transcriptome: GSM1684384
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1684384 Profile download | 3120102010200000000000-082 | Sequence Read Archive | SRP048838 | SRP048838_T30 | Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell Types | Transcriptome | Lgr5-positive intestinal cell (CBC cell) (Intestinal gland) | Mouse | Small intestine | RNA-Seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSMUSG00000097554 | Gm26825 | predicted gene, 26825 | 139.9156 |
| 2 | ENSMUSG00000058174 | Gm5148 | predicted gene 5148 | 109.7349 |
| 3 | ENSMUSG00000064368 | mt-Nd6 | mitochondrially encoded NADH dehydrogenase 6 | 83.6137 |
| 4 | ENSMUSG00000049521 | Cdc42ep1 | CDC42 effector protein (Rho GTPase binding) 1 | 50.5502 |
| 5 | ENSMUSG00000043633 | Fam221b | family with sequence similarity 221, member B | 35.1952 |
| 6 | ENSMUSG00000034377 | Tulp4 | tubby like protein 4 | 34.3715 |
| 7 | ENSMUSG00000097445 | Gm26631 | predicted gene, 26631 | 29.4885 |
| 8 | ENSMUSG00000006649 | Nphs1 | nephrosis 1, nephrin | 29.1355 |
| 9 | ENSMUSG00000056880 | Gadl1 | glutamate decarboxylase-like 1 | 28.6060 |
| 10 | ENSMUSG00000030126 | Tmcc1 | transmembrane and coiled coil domains 1 | 27.0764 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 54524 | ENSMUSG00000117332 | TEC | -0.0450 | |
| 54523 | ENSMUSG00000117331 | exocrine gland-secreting peptide pseudogene | -0.0450 | |
| 54522 | ENSMUSG00000117330 | ribosomal protein L18A (Rpl18a) pseudogene | -0.0450 | |
| 54521 | ENSMUSG00000117329 | zinc finger protein 541 (Zfp541) pseudogene | -0.0450 | |
| 54520 | ENSMUSG00000117328 | novel transcript, antisense to Smoc2 | -0.0450 | |
| 54519 | ENSMUSG00000117327 | NA | -0.0450 | |
| 54518 | ENSMUSG00000117326 | zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene | -0.0450 | |
| 54517 | ENSMUSG00000117325 | Opa interacting protein 5 (Oip5) pseudogene | -0.0450 | |
| 54516 | ENSMUSG00000117324 | novel transcript, antisense to Dscam | -0.0450 | |
| 54515 | ENSMUSG00000117323 | novel transcript | -0.0450 |
