SHOGoiN Cell Transcriptome: GSM1684384
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1684384 Profile download | 3120102010200000000000-082 | Sequence Read Archive | SRP048838 | SRP048838_T30 | Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell Types | Transcriptome | Lgr5-positive intestinal cell (CBC cell) (Intestinal gland) | Mouse | Small intestine | RNA-Seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 2 | ENSMUSG00000097554 | Gm26825 | predicted gene, 26825 | 107.2667 |
| 3 | ENSMUSG00000058174 | Gm5148 | predicted gene 5148 | 84.2823 |
| 4 | ENSMUSG00000064368 | mt-Nd6 | mitochondrially encoded NADH dehydrogenase 6 | 64.0019 |
| 5 | ENSMUSG00000049521 | Cdc42ep1 | CDC42 effector protein (Rho GTPase binding) 1 | 38.7190 |
| 6 | ENSMUSG00000043633 | Fam221b | family with sequence similarity 221, member B | 27.0015 |
| 7 | ENSMUSG00000034377 | Tulp4 | tubby like protein 4 | 26.3705 |
| 8 | ENSMUSG00000097445 | Gm26631 | predicted gene, 26631 | 22.5848 |
| 9 | ENSMUSG00000056880 | Gadl1 | glutamate decarboxylase-like 1 | 22.1792 |
| 10 | ENSMUSG00000030126 | Tmcc1 | transmembrane and coiled coil domains 1 | 20.7821 |
| 46589 | ENSMUSG00000108301 | Gm45127 | predicted gene 45127 | -0.0390 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 46598 | ENSMUSG00000108310 | Gm44712 | predicted gene 44712 | -0.0390 |
| 46597 | ENSMUSG00000108309 | Gm44703 | predicted gene 44703 | -0.0390 |
| 46596 | ENSMUSG00000108308 | Gm45218 | predicted gene 45218 | -0.0390 |
| 46595 | ENSMUSG00000108307 | Ceacam-ps1 | carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 | -0.0390 |
| 46594 | ENSMUSG00000108306 | Gm44640 | predicted gene 44640 | -0.0390 |
| 46593 | ENSMUSG00000108305 | Gm19078 | predicted gene, 19078 | -0.0390 |
| 46592 | ENSMUSG00000108304 | Gm4607 | predicted gene 4607 | -0.0390 |
| 46591 | ENSMUSG00000108303 | Gm39075 | predicted gene, 39075 | -0.0390 |
| 46590 | ENSMUSG00000108302 | Gm18207 | predicted gene, 18207 | -0.0390 |
| 46589 | ENSMUSG00000108301 | Gm45127 | predicted gene 45127 | -0.0390 |
