SHOGoiN Cell Transcriptome: GSM1684384

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1684384


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T30Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
2 ENSMUSG00000097554 Gm26825 predicted gene, 26825 107.2667
3 ENSMUSG00000058174 Gm5148 predicted gene 5148 84.2823
4 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 64.0019
5 ENSMUSG00000049521 Cdc42ep1 CDC42 effector protein (Rho GTPase binding) 1 38.7190
6 ENSMUSG00000043633 Fam221b family with sequence similarity 221, member B 27.0015
7 ENSMUSG00000034377 Tulp4 tubby like protein 4 26.3705
8 ENSMUSG00000097445 Gm26631 predicted gene, 26631 22.5848
9 ENSMUSG00000056880 Gadl1 glutamate decarboxylase-like 1 22.1792
10 ENSMUSG00000030126 Tmcc1 transmembrane and coiled coil domains 1 20.7821
46589 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.0390

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46598 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0390
46597 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0390
46596 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0390
46595 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0390
46594 ENSMUSG00000108306 Gm44640 predicted gene 44640 -0.0390
46593 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.0390
46592 ENSMUSG00000108304 Gm4607 predicted gene 4607 -0.0390
46591 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.0390
46590 ENSMUSG00000108302 Gm18207 predicted gene, 18207 -0.0390
46589 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.0390

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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