SHOGoiN Cell Transcriptome: GSM1684384

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1684384


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T30Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
2 ENSMUSG00000064352 mt-Ts1 mitochondrially encoded tRNA serine 1 93.6401
3 ENSMUSG00000097554 Gm26825 predicted gene, 26825 88.1205
4 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 84.4349
5 ENSMUSG00000058174 Gm5148 predicted gene 5148 60.8873
6 ENSMUSG00000103000 Gm37900 predicted gene, 37900 25.3789
7 ENSMUSG00000043633 Fam221b family with sequence similarity 221, member B 24.6140
8 ENSMUSG00000015484 Fam163a family with sequence similarity 163, member A 23.0407
9 ENSMUSG00000052917 Senp7 SUMO1/sentrin specific peptidase 7 22.9972
10 ENSMUSG00000049521 Cdc42ep1 CDC42 effector protein (Rho GTPase binding) 1 22.7191
46615 ENSMUSG00000108264 Gm20371 predicted gene, 20371 -0.0549

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108275 Gm7880 predicted gene 7880 -0.0549
46623 ENSMUSG00000108274 Gm44169 predicted gene, 44169 -0.0549
46621 ENSMUSG00000108272 Gm44161 predicted gene, 44161 -0.0549
46620 ENSMUSG00000108271 Gm44236 predicted gene, 44236 -0.0549
46619 ENSMUSG00000108270 Gm4602 predicted gene 4602 -0.0549
46618 ENSMUSG00000108269 Gm18422 predicted gene, 18422 -0.0549
46617 ENSMUSG00000108266 Gm5305 predicted gene 5305 -0.0549
46616 ENSMUSG00000108265 Olfr318 olfactory receptor 318 -0.0549
46615 ENSMUSG00000108264 Gm20371 predicted gene, 20371 -0.0549
10 ENSMUSG00000049521 Cdc42ep1 CDC42 effector protein (Rho GTPase binding) 1 22.7191

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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