SHOGoiN Cell Transcriptome: GSM1684384
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1684384 Profile download | 3120102010200000000000-082 | Sequence Read Archive | SRP048838 | SRP048838_T30 | Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell Types | Transcriptome | Lgr5-positive intestinal cell (CBC cell) (Intestinal gland) | Mouse | Small intestine | RNA-Seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 2 | ENSMUSG00000064352 | mt-Ts1 | mitochondrially encoded tRNA serine 1 | 93.6401 |
| 3 | ENSMUSG00000097554 | Gm26825 | predicted gene, 26825 | 88.1205 |
| 4 | ENSMUSG00000064368 | mt-Nd6 | mitochondrially encoded NADH dehydrogenase 6 | 84.4349 |
| 5 | ENSMUSG00000058174 | Gm5148 | predicted gene 5148 | 60.8873 |
| 6 | ENSMUSG00000103000 | Gm37900 | predicted gene, 37900 | 25.3789 |
| 7 | ENSMUSG00000043633 | Fam221b | family with sequence similarity 221, member B | 24.6140 |
| 8 | ENSMUSG00000015484 | Fam163a | family with sequence similarity 163, member A | 23.0407 |
| 9 | ENSMUSG00000052917 | Senp7 | SUMO1/sentrin specific peptidase 7 | 22.9972 |
| 10 | ENSMUSG00000049521 | Cdc42ep1 | CDC42 effector protein (Rho GTPase binding) 1 | 22.7191 |
| 46615 | ENSMUSG00000108264 | Gm20371 | predicted gene, 20371 | -0.0549 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 46624 | ENSMUSG00000108275 | Gm7880 | predicted gene 7880 | -0.0549 |
| 46623 | ENSMUSG00000108274 | Gm44169 | predicted gene, 44169 | -0.0549 |
| 46621 | ENSMUSG00000108272 | Gm44161 | predicted gene, 44161 | -0.0549 |
| 46620 | ENSMUSG00000108271 | Gm44236 | predicted gene, 44236 | -0.0549 |
| 46619 | ENSMUSG00000108270 | Gm4602 | predicted gene 4602 | -0.0549 |
| 46618 | ENSMUSG00000108269 | Gm18422 | predicted gene, 18422 | -0.0549 |
| 46617 | ENSMUSG00000108266 | Gm5305 | predicted gene 5305 | -0.0549 |
| 46616 | ENSMUSG00000108265 | Olfr318 | olfactory receptor 318 | -0.0549 |
| 46615 | ENSMUSG00000108264 | Gm20371 | predicted gene, 20371 | -0.0549 |
| 10 | ENSMUSG00000049521 | Cdc42ep1 | CDC42 effector protein (Rho GTPase binding) 1 | 22.7191 |
