SHOGoiN Cell Transcriptome: GSM1713189

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1713189


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6000001010000000000000-734Sequence Read ArchiveSRP059549SRP059549_T6Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionTranscriptomeMesenchymal Stem Cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 142.5023
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 112.9855
3 ENSMUSG00000029304 Spp1 secreted phosphoprotein 1 36.1059
4 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 35.0299
5 ENSMUSG00000101111 Gm28437 predicted gene 28437 34.6160
6 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 32.9275
7 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 23.1934
8 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 20.5943
9 ENSMUSG00000029580 Actb actin, beta 20.2135
10 ENSMUSG00000020368 Canx calnexin 20.0314

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0658
46623 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0658
46622 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0658
46621 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0658
46620 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0658
46619 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0658
46618 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0658
46617 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0658
46616 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0658
46615 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0658

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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