SHOGoiN Cell Transcriptome: GSM1713191

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1713191


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6000001010000000000000-734Sequence Read ArchiveSRP059549SRP059549_T8Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionTranscriptomeMesenchymal Stem Cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000029580 Actb actin, beta 118.3748
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 100.6261
3 ENSMUSG00000102349 Gm37376 predicted gene, 37376 76.6090
4 ENSMUSG00000020368 Canx calnexin 37.5197
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 31.1808
6 ENSMUSG00000008348 Ubc ubiquitin C 28.9270
7 ENSMUSG00000058013 Sept11 septin 11 25.1237
8 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 24.9829
9 ENSMUSG00000071072 Ptges3 prostaglandin E synthase 3 24.9125
10 ENSMUSG00000100862 Gm10925 predicted gene 10925 22.3065

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0907
46623 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0907
46622 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0907
46621 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0907
46620 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0907
46619 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0907
46618 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0907
46617 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0907
46616 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0907
46615 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0907

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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