SHOGoiN Cell Transcriptome: GSM1713193

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1713193


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6000001010000000000000-734Sequence Read ArchiveSRP059549SRP059549_T10Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionTranscriptomeMesenchymal Stem Cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 92.7218
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 71.4057
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 55.2249
4 ENSMUSG00000101111 Gm28437 predicted gene 28437 46.9245
5 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 46.7307
6 ENSMUSG00000029580 Actb actin, beta 45.9233
7 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 42.2091
8 ENSMUSG00000074743 Thbd thrombomodulin 37.9459
9 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 35.9112
10 ENSMUSG00000020368 Canx calnexin 35.4913

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1001
46623 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1001
46622 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1001
46621 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1001
46620 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1001
46619 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1001
46618 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1001
46617 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1001
46616 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.1001
46615 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.1001

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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