SHOGoiN Cell Transcriptome: GSM1713196

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1713196


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6000001010000000000000-734Sequence Read ArchiveSRP059549SRP059549_T13Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionTranscriptomeMesenchymal Stem Cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 128.7537
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 99.1151
3 ENSMUSG00000029580 Actb actin, beta 57.3993
4 ENSMUSG00000020368 Canx calnexin 46.5411
5 ENSMUSG00000026276 Sept2 septin 2 38.6744
6 ENSMUSG00000021427 Ssr1 signal sequence receptor, alpha 32.1649
7 ENSMUSG00000101111 Gm28437 predicted gene 28437 26.0987
8 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 25.4616
9 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 21.9160
10 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 21.6113

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0775
46623 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0775
46622 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0775
46621 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0775
46620 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0775
46619 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0775
46618 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0775
46617 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0775
46616 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0775
46615 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0775

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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