SHOGoiN Cell Transcriptome: GSM1822023

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1822023


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6000001010000000000000-734Sequence Read ArchiveSRP061185SRP061185_T2Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage primingTranscriptomeMesenchymal stem cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 124.3361
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 100.0706
3 ENSMUSG00000029580 Actb actin, beta 58.7940
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 45.9788
5 ENSMUSG00000026276 Sept2 septin 2 32.5570
6 ENSMUSG00000020368 Canx calnexin 32.0262
7 ENSMUSG00000101111 Gm28437 predicted gene 28437 29.5743
8 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 28.5885
9 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 27.7544
10 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 27.5775

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0750
46623 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0750
46622 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0750
46621 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0750
46620 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0750
46619 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0750
46618 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.0750
46617 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0750
46616 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0750
46615 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0750

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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