SHOGoiN Cell Transcriptome: GSM1822024

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1822024


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6000001010000000000000-734Sequence Read ArchiveSRP061185SRP061185_T3Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage primingTranscriptomeMesenchymal stem cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 126.8810
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 95.4455
3 ENSMUSG00000029580 Actb actin, beta 69.5972
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 38.5285
5 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 28.6802
6 ENSMUSG00000101111 Gm28437 predicted gene 28437 27.8055
7 ENSMUSG00000026276 Sept2 septin 2 27.6926
8 ENSMUSG00000020368 Canx calnexin 26.5921
9 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 25.1247
10 ENSMUSG00000062345 Serpinb2 serine (or cysteine) peptidase inhibitor, clade B, member 2 23.6573

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0745
46623 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0745
46622 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0745
46621 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0745
46620 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0745
46619 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0745
46618 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0745
46617 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0745
46616 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0745
46615 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0745

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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