SHOGoiN Cell Transcriptome: GSM1822031

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1822031


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6000001010000000000000-734Sequence Read ArchiveSRP061185SRP061185_T10Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage primingTranscriptomeMesenchymal stem cell (MSC)MouseBone marrowRNA-SeqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 134.5580
2 ENSMUSG00000102349 Gm37376 predicted gene, 37376 98.6001
3 ENSMUSG00000029580 Actb actin, beta 39.6957
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 38.3115
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 37.0504
6 ENSMUSG00000101111 Gm28437 predicted gene 28437 31.9751
7 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 30.4986
8 ENSMUSG00000035385 Ccl2 chemokine (C-C motif) ligand 2 29.5143
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 28.0994
10 ENSMUSG00000026276 Sept2 septin 2 25.3925

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0763
46623 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0763
46622 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0763
46621 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0763
46620 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.0763
46619 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0763
46618 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0763
46617 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0763
46616 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0763
46615 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0763

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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