SHOGoiN Cell Transcriptome: GSM1846949

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846949


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T1Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 96.1629
2 ENSG00000075624 ACTB actin beta 53.7149
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 51.9639
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 39.5571
5 ENSG00000258017 NA 34.9496
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.1617
7 ENSG00000123416 TUBA1B tubulin alpha 1b 32.0167
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.6377
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 30.0832
10 ENSG00000167552 TUBA1A tubulin alpha 1a 28.5255

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276904 DUX4L14 double homeobox 4 like 14 -0.1769
57170 ENSG00000276902 NA -0.1769
57169 ENSG00000276900 NA -0.1769
57168 ENSG00000276898 NA -0.1769
57167 ENSG00000276897 NA -0.1769
57166 ENSG00000276894 RAB28P4 RAB28, member RAS oncogene family pseudogene 4 -0.1769
57164 ENSG00000276892 NA -0.1769
57163 ENSG00000276891 RN7SL238P RNA, 7SL, cytoplasmic 238, pseudogene -0.1769
57162 ENSG00000276890 NA -0.1769
10 ENSG00000167552 TUBA1A tubulin alpha 1a 28.5255

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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