SHOGoiN Cell Transcriptome: GSM1846950

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846950


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T2Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 99.6584
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 59.2125
3 ENSG00000075624 ACTB actin beta 58.2570
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 51.0337
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.5105
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 45.3566
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 35.5994
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 34.4916
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.6130
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.5822

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276902 NA -0.1618
57170 ENSG00000276900 NA -0.1618
57169 ENSG00000276898 NA -0.1618
57168 ENSG00000276897 NA -0.1618
57167 ENSG00000276894 RAB28P4 RAB28, member RAS oncogene family pseudogene 4 -0.1618
57165 ENSG00000276892 NA -0.1618
57164 ENSG00000276891 RN7SL238P RNA, 7SL, cytoplasmic 238, pseudogene -0.1618
57163 ENSG00000276890 NA -0.1618
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.5822
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.6130

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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