SHOGoiN Cell Transcriptome: GSM1846951

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846951


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T3Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 130.0206
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 96.3770
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 74.9927
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 61.6625
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.9662
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 41.8430
7 ENSG00000075624 ACTB actin beta 36.6050
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 26.3189
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.6354
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 24.1130

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276900 NA -0.1230
57169 ENSG00000276898 NA -0.1230
57168 ENSG00000276897 NA -0.1230
57167 ENSG00000276894 RAB28P4 RAB28, member RAS oncogene family pseudogene 4 -0.1230
57165 ENSG00000276892 NA -0.1230
57164 ENSG00000276891 RN7SL238P RNA, 7SL, cytoplasmic 238, pseudogene -0.1230
57163 ENSG00000276890 NA -0.1230
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 24.1130
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.6354
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 26.3189

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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