SHOGoiN Cell Transcriptome: GSM1846952

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846952


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T4Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.4341
2 ENSG00000075624 ACTB actin beta 67.4306
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.9242
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.1705
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.4963
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 37.9198
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 29.9840
8 ENSG00000110321 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 26.7849
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 26.6267
10 ENSG00000184009 ACTG1 actin gamma 1 26.4857

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57168 ENSG00000276747 PADI6 peptidyl arginine deiminase 6 -0.1803
57167 ENSG00000276746 NA -0.1803
57165 ENSG00000276744 NA -0.1803
57162 ENSG00000276740 NA -0.1803
10 ENSG00000184009 ACTG1 actin gamma 1 26.4857
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 26.6267
8 ENSG00000110321 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 26.7849
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 29.9840
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 37.9198
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 40.4963

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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