SHOGoiN Cell Transcriptome: GSM1846953

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846953


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T5Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 101.3912
2 ENSG00000075624 ACTB actin beta 57.7325
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 54.4143
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.6958
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 42.8720
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.6162
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 34.1134
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 31.2149
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.4709
10 ENSG00000110955 ATP5F1B ATP synthase F1 subunit beta 27.3582

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276788 SNORD26 small nucleolar RNA, C/D box 26 -0.1690
57170 ENSG00000276786 NA -0.1690
57169 ENSG00000276784 NA -0.1690
57167 ENSG00000276782 NA -0.1690
57166 ENSG00000276775 IGHV4-4 immunoglobulin heavy variable 4-4 -0.1690
57164 ENSG00000276772 NA -0.1690
57163 ENSG00000276771 NA -0.1690
57162 ENSG00000276770 MIR6780B microRNA 6780b -0.1690
10 ENSG00000110955 ATP5F1B ATP synthase F1 subunit beta 27.3582
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.4709

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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