SHOGoiN Cell Transcriptome: GSM1846955

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846955


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T7Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 147.2185
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 77.2966
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 61.0054
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 55.3812
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.0066
6 ENSG00000075624 ACTB actin beta 43.7010
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 27.6092
8 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 26.9016
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.1841
10 ENSG00000272398 CD24 CD24 molecule 24.9681

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276768 NA -0.1330
57170 ENSG00000276765 MIR8073 microRNA 8073 -0.1330
57169 ENSG00000276764 NA -0.1330
57167 ENSG00000276760 POTE ankyrin domain family member B-like -0.1330
57166 ENSG00000276759 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -0.1330
57165 ENSG00000276758 NA -0.1330
57164 ENSG00000276757 RN7SL192P RNA, 7SL, cytoplasmic 192, pseudogene -0.1330
57163 ENSG00000276756 NA -0.1330
57162 ENSG00000276755 NA -0.1330
10 ENSG00000272398 CD24 CD24 molecule 24.9681

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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