SHOGoiN Cell Transcriptome: GSM1846956

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846956


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T8Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 127.4656
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 83.1860
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 63.6722
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 63.1511
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 60.1172
6 ENSG00000075624 ACTB actin beta 43.1848
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.4613
8 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 23.7872
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.2925
10 ENSG00000140545 MFGE8 milk fat globule-EGF factor 8 protein 21.4618

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276810 NA -0.1361
57169 ENSG00000276809 NA -0.1361
57168 ENSG00000276807 NA -0.1361
57166 ENSG00000276800 NA -0.1361
57163 ENSG00000276795 NA -0.1361
10 ENSG00000140545 MFGE8 milk fat globule-EGF factor 8 protein 21.4618
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.2925
8 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 23.7872
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.4613
6 ENSG00000075624 ACTB actin beta 43.1848

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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