SHOGoiN Cell Transcriptome: GSM1846957

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846957


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T9Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 124.3363
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 84.1087
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 65.3431
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 64.4782
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.0842
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 47.8259
7 ENSG00000075624 ACTB actin beta 38.3003
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.6141
9 ENSG00000119335 SET SET nuclear proto-oncogene 27.9646
10 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 25.1194

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276945 NA -0.1349
57167 ENSG00000276941 MIR4509-1 microRNA 4509-1 -0.1349
57166 ENSG00000276940 PLCE1P1 phospholipase C epsilon 1 pseudogene 1 -0.1349
57163 ENSG00000276934 NA -0.1349
10 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 25.1194
9 ENSG00000119335 SET SET nuclear proto-oncogene 27.9646
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.6141
7 ENSG00000075624 ACTB actin beta 38.3003
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 47.8259
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.0842

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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