SHOGoiN Cell Transcriptome: GSM1846958

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846958


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T10Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.8293
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.0491
3 ENSG00000075624 ACTB actin beta 53.3545
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 51.6716
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.2193
6 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 38.7317
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 34.5245
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.9452
9 ENSG00000269968 NA 31.5284
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.4799

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276911 NA -0.1746
57170 ENSG00000276908 MIR7106 microRNA 7106 -0.1746
57169 ENSG00000276904 DUX4L14 double homeobox 4 like 14 -0.1746
57168 ENSG00000276903 HIST1H2AL histone cluster 1 H2A family member l -0.1746
57167 ENSG00000276902 NA -0.1746
57166 ENSG00000276900 NA -0.1746
57165 ENSG00000276898 NA -0.1746
57164 ENSG00000276897 NA -0.1746
57162 ENSG00000276892 NA -0.1746
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.4799

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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