SHOGoiN Cell Transcriptome: GSM1846960

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846960


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T12Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 117.7205
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 90.2223
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 65.9782
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 59.7936
5 ENSG00000075624 ACTB actin beta 53.4405
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 49.0605
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 44.1070
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.1824
9 ENSG00000258017 NA 23.4090
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 22.6040

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276819 TRBV15 T cell receptor beta variable 15 -0.1379
57167 ENSG00000276814 NA -0.1379
57164 ENSG00000276810 NA -0.1379
57163 ENSG00000276809 NA -0.1379
57162 ENSG00000276807 NA -0.1379
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 22.6040
9 ENSG00000258017 NA 23.4090
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.1824
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 44.1070
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 49.0605

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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