SHOGoiN Cell Transcriptome: GSM1846961

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846961


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T13Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 105.4152
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 69.6879
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 58.4735
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 48.4896
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 45.7516
6 ENSG00000075624 ACTB actin beta 43.7452
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.3450
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 29.6634
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 28.4404
10 ENSG00000269968 NA 25.3661

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276854 NA -0.1628
57170 ENSG00000276853 NA -0.1628
57168 ENSG00000276851 NA -0.1628
57167 ENSG00000276850 NA -0.1628
57166 ENSG00000276846 NA -0.1628
57165 ENSG00000276845 NA -0.1628
57164 ENSG00000276844 SNORD115-46 small nucleolar RNA, C/D box 115-46 -0.1628
57163 ENSG00000276842 NA -0.1628
57162 ENSG00000276841 NA -0.1628
10 ENSG00000269968 NA 25.3661

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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