SHOGoiN Cell Transcriptome: GSM1846962

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846962


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T14Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 131.0605
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 79.0180
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 65.1075
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 62.9754
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.6799
6 ENSG00000075624 ACTB actin beta 46.4770
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 40.1305
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.8308
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.6831
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.4333

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276863 NA -0.1306
57169 ENSG00000276861 NA -0.1306
57168 ENSG00000276857 MIR6715A microRNA 6715a -0.1306
57167 ENSG00000276854 NA -0.1306
57166 ENSG00000276853 NA -0.1306
57164 ENSG00000276851 NA -0.1306
57163 ENSG00000276850 NA -0.1306
57162 ENSG00000276846 NA -0.1306
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.4333
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.6831

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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