SHOGoiN Cell Transcriptome: GSM1846963

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846963


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T15Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 145.9045
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 95.0712
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 76.4549
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 63.7005
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 50.2512
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 40.7182
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 34.9928
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 31.0361
9 ENSG00000075624 ACTB actin beta 28.7091
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 26.1521

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276904 DUX4L14 double homeobox 4 like 14 -0.1046
57170 ENSG00000276903 HIST1H2AL histone cluster 1 H2A family member l -0.1046
57169 ENSG00000276902 NA -0.1046
57168 ENSG00000276900 NA -0.1046
57167 ENSG00000276898 NA -0.1046
57166 ENSG00000276897 NA -0.1046
57165 ENSG00000276894 RAB28P4 RAB28, member RAS oncogene family pseudogene 4 -0.1046
57163 ENSG00000276892 NA -0.1046
57162 ENSG00000276891 RN7SL238P RNA, 7SL, cytoplasmic 238, pseudogene -0.1046
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 26.1521

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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