SHOGoiN Cell Transcriptome: GSM1846964

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846964


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T16Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 190.2239
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 66.9688
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 62.2759
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 56.8317
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.0595
6 ENSG00000075624 ACTB actin beta 21.9569
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 19.5180
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 19.4661
9 ENSG00000119335 SET SET nuclear proto-oncogene 18.5798
10 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 16.8791

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276769 MIR6752 microRNA 6752 -0.0956
57170 ENSG00000276765 MIR8073 microRNA 8073 -0.0956
57169 ENSG00000276764 NA -0.0956
57167 ENSG00000276760 POTE ankyrin domain family member B-like -0.0956
57166 ENSG00000276759 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -0.0956
57165 ENSG00000276758 NA -0.0956
57164 ENSG00000276757 RN7SL192P RNA, 7SL, cytoplasmic 192, pseudogene -0.0956
57163 ENSG00000276755 NA -0.0956
57162 ENSG00000276754 NA -0.0956
10 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 16.8791

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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