SHOGoiN Cell Transcriptome: GSM1846966

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846966


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T18Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 198.5367
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 52.6772
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.1270
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.2407
5 ENSG00000075624 ACTB actin beta 24.9588
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 18.1563
7 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 18.0523
8 ENSG00000119335 SET SET nuclear proto-oncogene 17.0615
9 ENSG00000258017 NA 16.5358
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 15.4873

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276829 NA -0.1166
57170 ENSG00000276828 NA -0.1166
57168 ENSG00000276824 MIR7159 microRNA 7159 -0.1166
57167 ENSG00000276823 NA -0.1166
57166 ENSG00000276822 NA -0.1166
57165 ENSG00000276819 TRBV15 T cell receptor beta variable 15 -0.1166
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 15.4873
9 ENSG00000258017 NA 16.5358
8 ENSG00000119335 SET SET nuclear proto-oncogene 17.0615
7 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 18.0523

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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