SHOGoiN Cell Transcriptome: GSM1846970

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846970


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T22Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 244.3201
2 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 17.8908
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 12.4525
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 11.9230
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 9.3471
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 8.6561
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 5.0767
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 4.3031
9 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 4.0637
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 3.8810

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277035 NA -0.0115
57170 ENSG00000277034 NA -0.0115
57169 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0115
57168 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.0115
57167 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.0115
57166 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.0115
57164 ENSG00000277024 NA -0.0115
57162 ENSG00000277022 NA -0.0115
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 3.8810
9 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 4.0637

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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