SHOGoiN Cell Transcriptome: GSM1846972

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846972


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T24Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 134.7362
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 76.9281
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 63.4986
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 60.2580
5 ENSG00000075624 ACTB actin beta 55.6621
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.5749
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 40.1924
8 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 25.2648
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 23.4400
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 20.3785

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276872 NA -0.1300
57170 ENSG00000276871 NA -0.1300
57169 ENSG00000276869 MIR6729 microRNA 6729 -0.1300
57168 ENSG00000276868 NA -0.1300
57167 ENSG00000276867 NA -0.1300
57166 ENSG00000276866 MIR7151 microRNA 7151 -0.1300
57164 ENSG00000276863 NA -0.1300
57162 ENSG00000276861 NA -0.1300
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 20.3785
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 23.4400

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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