SHOGoiN Cell Transcriptome: GSM1846974

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846974


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T26Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 110.4680
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 82.1153
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 76.2959
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 66.5937
5 ENSG00000075624 ACTB actin beta 56.7583
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.0689
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.7173
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.0708
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 27.9637
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.1059

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276835 MIR6127 microRNA 6127 -0.1323
57170 ENSG00000276832 NA -0.1323
57169 ENSG00000276831 NA -0.1323
57168 ENSG00000276830 MIR6730 microRNA 6730 -0.1323
57167 ENSG00000276829 NA -0.1323
57166 ENSG00000276828 NA -0.1323
57164 ENSG00000276824 MIR7159 microRNA 7159 -0.1323
57163 ENSG00000276823 NA -0.1323
57162 ENSG00000276822 NA -0.1323
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.1059

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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