SHOGoiN Cell Transcriptome: GSM1846977

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846977


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T29Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 130.0393
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.0697
3 ENSG00000075624 ACTB actin beta 59.9311
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 52.0274
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 42.9723
6 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 40.2908
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.5014
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.8976
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.7837
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.4055

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276892 NA -0.1344
57169 ENSG00000276891 RN7SL238P RNA, 7SL, cytoplasmic 238, pseudogene -0.1344
57168 ENSG00000276890 NA -0.1344
57165 ENSG00000276878 MIR6074 microRNA 6074 -0.1344
57163 ENSG00000276874 NA -0.1344
57162 ENSG00000276873 NA -0.1344
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.4055
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.7837
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 30.8976
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.5014

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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