SHOGoiN Cell Transcriptome: GSM1846978

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846978


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T30Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 129.5810
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 70.5273
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 65.7655
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 58.5184
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 54.7540
6 ENSG00000075624 ACTB actin beta 41.9432
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.6541
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.6666
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 26.8724
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 26.5510

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276831 NA -0.1410
57170 ENSG00000276830 MIR6730 microRNA 6730 -0.1410
57169 ENSG00000276829 NA -0.1410
57168 ENSG00000276828 NA -0.1410
57166 ENSG00000276824 MIR7159 microRNA 7159 -0.1410
57165 ENSG00000276823 NA -0.1410
57164 ENSG00000276822 NA -0.1410
57163 ENSG00000276819 TRBV15 T cell receptor beta variable 15 -0.1410
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 26.5510
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 26.8724

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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