SHOGoiN Cell Transcriptome: GSM1846979

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846979


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T31Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 145.1210
2 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 77.5120
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 76.6029
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 64.5050
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 57.8475
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 41.2125
7 ENSG00000075624 ACTB actin beta 38.3711
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 25.9995
9 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 25.9682
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.9508

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276888 NA -0.1144
57169 ENSG00000276884 NA -0.1144
57167 ENSG00000276878 MIR6074 microRNA 6074 -0.1144
57165 ENSG00000276874 NA -0.1144
57164 ENSG00000276873 NA -0.1144
57163 ENSG00000276872 NA -0.1144
57162 ENSG00000276871 NA -0.1144
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.9508
9 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 25.9682
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 25.9995

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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