SHOGoiN Cell Transcriptome: GSM1846980

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846980


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T32Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 124.2851
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 88.2194
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 70.3934
4 ENSG00000075624 ACTB actin beta 57.5716
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.5518
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 46.3530
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 30.5779
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.9341
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.3548
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 24.0320

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276932 NA -0.1280
57170 ENSG00000276931 NA -0.1280
57169 ENSG00000276929 NA -0.1280
57168 ENSG00000276928 NA -0.1280
57167 ENSG00000276926 MIR6797 microRNA 6797 -0.1280
57166 ENSG00000276925 NA -0.1280
57164 ENSG00000276923 NA -0.1280
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 24.0320
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.3548
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.9341

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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