SHOGoiN Cell Transcriptome: GSM1846981

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846981


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T33Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 125.3748
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 77.4727
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 76.3875
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 63.4740
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.0055
6 ENSG00000075624 ACTB actin beta 43.8531
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 39.3797
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 26.1664
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 25.8799
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 24.1154

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276872 NA -0.1354
57170 ENSG00000276871 NA -0.1354
57169 ENSG00000276869 MIR6729 microRNA 6729 -0.1354
57168 ENSG00000276867 NA -0.1354
57167 ENSG00000276866 MIR7151 microRNA 7151 -0.1354
57165 ENSG00000276863 NA -0.1354
57163 ENSG00000276861 NA -0.1354
57162 ENSG00000276857 MIR6715A microRNA 6715a -0.1354
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 24.1154
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 25.8799

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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