SHOGoiN Cell Transcriptome: GSM1846983

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846983


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T35Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 241.7945
2 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.6627
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 20.5032
4 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 14.3590
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 13.3582
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 10.0760
7 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 8.3668
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 8.1257
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 6.8380
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 3.9048

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0150
57168 ENSG00000277109 NA -0.0150
57167 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0150
57164 ENSG00000277103 NA -0.0150
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 3.9048
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 6.8380
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 8.1257
7 ENSG00000212907 MT-ND4L mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L 8.3668
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 10.0760
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 13.3582

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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