SHOGoiN Cell Transcriptome: GSM1846986

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846986


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T38Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 235.5164
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 39.0660
3 ENSG00000075624 ACTB actin beta 17.8464
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 17.8390
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 15.3635
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 11.9282
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 9.4686
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 9.1350
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 8.8646
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 8.1668

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276770 MIR6780B microRNA 6780b -0.0494
57170 ENSG00000276769 MIR6752 microRNA 6752 -0.0494
57169 ENSG00000276768 NA -0.0494
57168 ENSG00000276765 MIR8073 microRNA 8073 -0.0494
57167 ENSG00000276764 NA -0.0494
57166 ENSG00000276763 NA -0.0494
57164 ENSG00000276760 POTE ankyrin domain family member B-like -0.0494
57163 ENSG00000276759 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -0.0494
57162 ENSG00000276758 NA -0.0494
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 8.1668

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...