SHOGoiN Cell Transcriptome: GSM1846987

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846987


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T39Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 236.9259
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 37.5854
3 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 17.2086
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 16.7582
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 16.5585
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 13.7257
7 ENSG00000075624 ACTB actin beta 13.5269
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 8.9479
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 7.5371
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 6.8777

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000276810 NA -0.0428
57168 ENSG00000276809 NA -0.0428
57167 ENSG00000276807 NA -0.0428
57165 ENSG00000276800 NA -0.0428
57162 ENSG00000276795 NA -0.0428
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 6.8777
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 7.5371
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 8.9479
7 ENSG00000075624 ACTB actin beta 13.5269
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 13.7257

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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