SHOGoiN Cell Transcriptome: GSM1846988

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846988


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T40Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 236.7987
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 38.7698
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 19.6575
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 14.9303
5 ENSG00000075624 ACTB actin beta 12.8034
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 12.3673
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 8.8003
8 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 7.8687
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 6.9311
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 6.9160

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276775 IGHV4-4 immunoglobulin heavy variable 4-4 -0.0449
57169 ENSG00000276772 NA -0.0449
57168 ENSG00000276771 NA -0.0449
57167 ENSG00000276770 MIR6780B microRNA 6780b -0.0449
57166 ENSG00000276769 MIR6752 microRNA 6752 -0.0449
57165 ENSG00000276768 NA -0.0449
57164 ENSG00000276765 MIR8073 microRNA 8073 -0.0449
57163 ENSG00000276764 NA -0.0449
57162 ENSG00000276763 NA -0.0449
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 6.9160

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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