SHOGoiN Cell Transcriptome: GSM1846990

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846990


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T42Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 234.7220
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 32.2280
3 ENSG00000075624 ACTB actin beta 20.9438
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 18.2497
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 15.4663
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 14.5329
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 10.5106
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 10.1010
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 9.6288
10 ENSG00000184009 ACTG1 actin gamma 1 8.4216

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276753 MIR6821 microRNA 6821 -0.0534
57166 ENSG00000276747 PADI6 peptidyl arginine deiminase 6 -0.0534
57165 ENSG00000276746 NA -0.0534
57163 ENSG00000276744 NA -0.0534
10 ENSG00000184009 ACTG1 actin gamma 1 8.4216
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 9.6288
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 10.1010
7 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 10.5106
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 14.5329
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 15.4663

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...