SHOGoiN Cell Transcriptome: GSM1846991

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846991


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T43Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 117.5988
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 76.2736
3 ENSG00000075624 ACTB actin beta 63.2195
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 58.7872
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 57.8343
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.7412
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 28.8246
8 ENSG00000272398 CD24 CD24 molecule 28.6391
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.3964
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 26.6406

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276869 MIR6729 microRNA 6729 -0.1529
57170 ENSG00000276868 NA -0.1529
57169 ENSG00000276867 NA -0.1529
57168 ENSG00000276866 MIR7151 microRNA 7151 -0.1529
57166 ENSG00000276863 NA -0.1529
57164 ENSG00000276861 NA -0.1529
57163 ENSG00000276857 MIR6715A microRNA 6715a -0.1529
57162 ENSG00000276855 NA -0.1529
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 26.6406
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.3964

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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