SHOGoiN Cell Transcriptome: GSM1846992

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1846992


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7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T44Fixed single-cell transcriptomic characterization of human radial glial diversityTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 120.0683
2 ENSG00000075624 ACTB actin beta 66.9510
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 57.6336
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 57.1134
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 52.2328
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 44.9399
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 35.7154
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.3092
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.7227
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 26.6433

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276845 NA -0.1490
57170 ENSG00000276844 SNORD115-46 small nucleolar RNA, C/D box 115-46 -0.1490
57169 ENSG00000276842 NA -0.1490
57168 ENSG00000276841 NA -0.1490
57167 ENSG00000276840 PMS2P10 PMS1 homolog 2, mismatch repair system component pseudogene 10 -0.1490
57166 ENSG00000276839 NA -0.1490
57165 ENSG00000276835 MIR6127 microRNA 6127 -0.1490
57164 ENSG00000276832 NA -0.1490
57163 ENSG00000276831 NA -0.1490
57162 ENSG00000276829 NA -0.1490

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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