SHOGoiN Cell Transcriptome: GSM1977399

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977399


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T1Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP++ Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.6990
2 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 79.5796
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 73.4381
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 60.7055
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 59.9696
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 54.3527
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 53.4492
8 ENSG00000075624 ACTB actin beta 44.1536
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 35.4874
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 30.8168

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000273474 NA -0.0994
57170 ENSG00000273473 NA -0.0994
57169 ENSG00000273471 NA -0.0994
57168 ENSG00000273461 NA -0.0994
57167 ENSG00000273455 NA -0.0994
57166 ENSG00000273450 NA -0.0994
57165 ENSG00000273444 NA -0.0994
57164 ENSG00000273434 OR8S21P olfactory receptor family 8 subfamily S member 21 pseudogene -0.0994
57163 ENSG00000273433 NA -0.0994
57162 ENSG00000273420 NA -0.0994

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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