SHOGoiN Cell Transcriptome: GSM1977400

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977400


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T2Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP-- Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 107.5030
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 95.8039
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 86.7860
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.0613
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 53.7430
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 51.4372
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.8427
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 35.3525
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.6577
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.0040

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000272968 RBAK-RBAKDN RBAK-RBAKDN readthrough -0.0841
57170 ENSG00000272967 NA -0.0841
57169 ENSG00000272963 OR7A19P olfactory receptor family 7 subfamily A member 19 pseudogene -0.0841
57168 ENSG00000272958 NA -0.0841
57167 ENSG00000272953 NA -0.0841
57166 ENSG00000272948 NA -0.0841
57165 ENSG00000272944 NA -0.0841
57164 ENSG00000272937 OR6U2P olfactory receptor family 6 subfamily U member 2 pseudogene -0.0841
57163 ENSG00000272934 NA -0.0841
57162 ENSG00000272923 NA -0.0841

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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