SHOGoiN Cell Transcriptome: GSM1977400

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977400


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T2Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP-- Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 125.9267
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 84.3480
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.6593
4 ENSG00000100316 RPL3 ribosomal protein L3 66.8100
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 44.7332
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 43.2550
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.1738
8 ENSG00000137154 RPS6 ribosomal protein S6 33.2142
9 ENSG00000149273 RPS3 ribosomal protein S3 31.1051
10 ENSG00000174748 RPL15 ribosomal protein L15 30.0066

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57055 ENSG00000273629 NA -0.0683
57054 ENSG00000273627 MIR4726 microRNA 4726 -0.0683
57052 ENSG00000273621 NA -0.0683
57050 ENSG00000273618 TEC -0.0683
57049 ENSG00000273614 NA -0.0683
57048 ENSG00000273613 MIR6511A4 microRNA 6511a-4 -0.0683
10 ENSG00000174748 RPL15 ribosomal protein L15 30.0066
9 ENSG00000149273 RPS3 ribosomal protein S3 31.1051
8 ENSG00000137154 RPS6 ribosomal protein S6 33.2142
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 41.1738

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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