SHOGoiN Cell Transcriptome: GSM1977401

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977401


Profile download
8020000000000000000000-724Sequence Read ArchiveSRP067661SRP067661_T3Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeHematopoietic stem cell (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.4859
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 80.6671
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 77.3234
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.5479
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 68.3033
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 56.4513
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.5753
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.8739
9 ENSG00000150991 UBC ubiquitin C 36.1426
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 30.9171

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000274391 TPTE transmembrane phosphatase with tensin homology -0.0903
57169 ENSG00000274385 NA -0.0903
57168 ENSG00000274381 NA -0.0903
57167 ENSG00000274380 MIR6801 microRNA 6801 -0.0903
57166 ENSG00000274379 NA -0.0903
57164 ENSG00000274376 ADAMTS7P1 ADAMTS7 pseudogene 1 -0.0903
57163 ENSG00000274370 NA -0.0903
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 30.9171
9 ENSG00000150991 UBC ubiquitin C 36.1426
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.8739

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...