SHOGoiN Cell Transcriptome: GSM1977401

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977401


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8020000000000000000000-724Sequence Read ArchiveSRP067661SRP067661_T3Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeHematopoietic stem cell (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 114.9174
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.0712
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 63.2033
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 60.9240
5 ENSG00000100316 RPL3 ribosomal protein L3 58.3767
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 57.0544
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 46.8850
8 ENSG00000174748 RPL15 ribosomal protein L15 34.1171
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.8119
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.9965

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57057 ENSG00000274797 novel transcript, antisense to HIGD1C -0.0760
57053 ENSG00000274792 olfactory receptor 4N4 -0.0760
57052 ENSG00000274791 F8A2 coagulation factor VIII associated 2 -0.0760
57051 ENSG00000274790 NA -0.0760
57049 ENSG00000274777 NA -0.0760
57048 ENSG00000274776 novel transcript -0.0760
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.9965
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.8119
8 ENSG00000174748 RPL15 ribosomal protein L15 34.1171
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 46.8850

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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