SHOGoiN Cell Transcriptome: GSM1977401

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977401


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8020000000000000000000-724Sequence Read ArchiveSRP067661SRP067661_T3Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeHematopoietic stem cell (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 113.5350
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.4768
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 64.1719
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 61.6186
5 ENSG00000100316 RPL3 ribosomal protein L3 55.8555
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 55.5770
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 46.4345
8 ENSG00000174748 RPL15 ribosomal protein L15 33.8127
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.5716
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.4808

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0762
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0762
58733 ENSG00000285992 novel transcript -0.0762
58732 ENSG00000285991 novel transcript -0.0762
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0762
58730 ENSG00000285989 TEC -0.0762
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0762
58728 ENSG00000285987 NA -0.0762
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0762
58726 ENSG00000285985 NA -0.0762

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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