SHOGoiN Cell Transcriptome: GSM1977402

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977402


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8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T4Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP+- CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.3641
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 86.1682
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 85.6600
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 64.6200
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 57.0090
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 53.5542
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.9815
8 ENSG00000150991 UBC ubiquitin C 36.0840
9 ENSG00000075624 ACTB actin beta 35.1607
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 32.9648

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000270951 NA -0.1047
57170 ENSG00000270948 MTDHP1 metadherin pseudogene 1 -0.1047
57169 ENSG00000270938 RAP2CP1 RAP2C pseudogene 1 -0.1047
57168 ENSG00000270937 NA -0.1047
57167 ENSG00000270936 NA -0.1047
57166 ENSG00000270930 GRAMD4P8 GRAM domain containing 4 pseudogene 8 -0.1047
57165 ENSG00000270924 NA -0.1047
57164 ENSG00000270921 CICP23 capicua transcriptional repressor pseudogene 23 -0.1047
57163 ENSG00000270912 RPS28P1 ribosomal protein S28 pseudogene 1 -0.1047
57162 ENSG00000270911 NA -0.1047

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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