SHOGoiN Cell Transcriptome: GSM1977402

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T4Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP+- CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 120.4931
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 72.8544
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.3565
4 ENSG00000075624 ACTB actin beta 51.9089
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 51.8744
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 48.6856
7 ENSG00000100316 RPL3 ribosomal protein L3 47.5812
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.9459
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.8467
10 ENSG00000137154 RPS6 ribosomal protein S6 29.6580

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0863
58734 ENSG00000285992 novel transcript -0.0863
58733 ENSG00000285989 TEC -0.0863
58732 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0863
58731 ENSG00000285982 novel protein -0.0863
58730 ENSG00000285977 novel transcript, antisense to CSMD1 -0.0863
58729 ENSG00000285975 Putative protein FAM90A7P -0.0863
58728 ENSG00000285968 novel transcript -0.0863
58727 ENSG00000285963 novel transcript -0.0863
58726 ENSG00000285961 novel transcript -0.0863

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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