SHOGoiN Cell Transcriptome: GSM1977404

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977404


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T6Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP-- Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 87.9783
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 86.3908
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 83.3161
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 61.5428
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 61.2649
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 53.5106
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.9302
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 31.7781
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.7639
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 30.4794

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000274805 MIR6768 microRNA 6768 -0.0959
57169 ENSG00000274800 NA -0.0959
57168 ENSG00000274798 NA -0.0959
57164 ENSG00000274792 olfactory receptor 4N4 -0.0959
57163 ENSG00000274790 NA -0.0959
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 30.4794
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.7639
8 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 31.7781
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 51.9302
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 53.5106

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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