SHOGoiN Cell Transcriptome: GSM1977404

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977404


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T6Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP-- Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 115.5344
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.5831
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 69.8517
4 ENSG00000100316 RPL3 ribosomal protein L3 60.5814
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 50.8333
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.2978
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 44.5459
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.7592
9 ENSG00000137154 RPS6 ribosomal protein S6 35.0671
10 ENSG00000174748 RPL15 ribosomal protein L15 31.1137

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57057 ENSG00000275040 novel transcript -0.0795
57055 ENSG00000275038 novel transcript, antisense to TLX3 -0.0795
57054 ENSG00000275036 MIR8086 microRNA 8086 -0.0795
57053 ENSG00000275034 TP53TG3E TP53 target 3 family member E -0.0795
57052 ENSG00000275033 NA -0.0795
57050 ENSG00000275030 RNU6-538P RNA, U6 small nuclear 538, pseudogene -0.0795
57048 ENSG00000275026 GXYLT1P4 glucoside xylosyltransferase 1 pseudogene 4 -0.0795
10 ENSG00000174748 RPL15 ribosomal protein L15 31.1137
9 ENSG00000137154 RPS6 ribosomal protein S6 35.0671
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.7592

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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