SHOGoiN Cell Transcriptome: GSM1977405

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T7Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP++ Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 99.5801
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 91.6277
3 ENSG00000075624 ACTB actin beta 71.4139
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 53.5656
5 ENSG00000100316 RPL3 ribosomal protein L3 52.6516
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.4324
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 40.9104
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.4296
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.8282
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 34.3323

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285993 novel transcript, antisense to RNF165 -0.0845
58734 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0845
58733 ENSG00000285989 TEC -0.0845
58732 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0845
58731 ENSG00000285984 novel transcript -0.0845
58730 ENSG00000285982 novel protein -0.0845
58729 ENSG00000285981 NA -0.0845
58728 ENSG00000285977 novel transcript, antisense to CSMD1 -0.0845
58727 ENSG00000285976 Protein tyrosine phosphatase type IVA 1 -0.0845
58726 ENSG00000285975 Putative protein FAM90A7P -0.0845

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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