SHOGoiN Cell Transcriptome: GSM1977405

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977405


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T7Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP++ Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 103.8910
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 93.1444
3 ENSG00000075624 ACTB actin beta 57.2457
4 ENSG00000100316 RPL3 ribosomal protein L3 55.2822
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 55.2471
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 50.9549
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 40.1719
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.6173
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.7344
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 37.0816

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57057 ENSG00000273330 CYP4F36P cytochrome P450 family 4 subfamily F member 36, pseudogene -0.0852
57056 ENSG00000273328 novel transcript -0.0852
57055 ENSG00000273325 novel transcript -0.0852
57054 ENSG00000273308 novel transcript -0.0852
57053 ENSG00000273305 novel transcript -0.0852
57052 ENSG00000273299 novel transcript -0.0852
57051 ENSG00000273295 novel transcript -0.0852
57050 ENSG00000273291 novel protein -0.0852
57049 ENSG00000273289 novel transcript, antisense to C22orf26 -0.0852
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 37.0816

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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