SHOGoiN Cell Transcriptome: GSM1977405

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977405


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8020000000000000000000-737Sequence Read ArchiveSRP067661SRP067661_T7Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeCMP++ Myeloid stem cell (CFU-GEMM, CMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 123.8222
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 67.5172
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 66.1685
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 62.7544
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 50.3071
6 ENSG00000075624 ACTB actin beta 48.0340
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 47.4242
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 45.5384
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 34.6405
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.2047

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000272485 NA -0.1030
57170 ENSG00000272482 NA -0.1030
57169 ENSG00000272480 OR13Z3P olfactory receptor family 13 subfamily Z member 3 pseudogene -0.1030
57168 ENSG00000272479 NA -0.1030
57167 ENSG00000272478 NA -0.1030
57166 ENSG00000272477 NA -0.1030
57165 ENSG00000272474 SNORD113-5 small nucleolar RNA, C/D box 113-5 -0.1030
57164 ENSG00000272473 NA -0.1030
57163 ENSG00000272472 NA -0.1030
57162 ENSG00000272469 RN7SL760P RNA, 7SL, cytoplasmic 760, pseudogene -0.1030

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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