SHOGoiN Cell Transcriptome: GSM1977407

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977407


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8020000000000000000000-724Sequence Read ArchiveSRP067661SRP067661_T9Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeHematopoietic stem cell (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 113.8469
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 75.0985
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.8087
4 ENSG00000100316 RPL3 ribosomal protein L3 62.5386
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.5290
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 42.8318
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 40.6486
8 ENSG00000019582 CD74 CD74 molecule 35.4902
9 ENSG00000149273 RPS3 ribosomal protein S3 34.4202
10 ENSG00000174748 RPL15 ribosomal protein L15 32.1781

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57057 ENSG00000274340 novel transcript -0.0906
57055 ENSG00000274333 uncharacterized LOC102724219 -0.0906
57054 ENSG00000274331 novel transcript -0.0906
57053 ENSG00000274330 ADAM metallopeptidase domain 20 (ADAM20) pseudogene -0.0906
57052 ENSG00000274328 gem (nuclear organelle) associated protein 7 (GEMIN7) pseudogene -0.0906
57050 ENSG00000274322 novel transcript -0.0906
57049 ENSG00000274321 NA -0.0906
57048 ENSG00000274319 RPSAP73 ribosomal protein SA pseudogene 73 -0.0906
10 ENSG00000174748 RPL15 ribosomal protein L15 32.1781
9 ENSG00000149273 RPS3 ribosomal protein S3 34.4202

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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