SHOGoiN Cell Transcriptome: GSM1977407

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977407


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8020000000000000000000-724Sequence Read ArchiveSRP067661SRP067661_T9Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeHematopoietic stem cell (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 112.4607
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 76.2964
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.5189
4 ENSG00000100316 RPL3 ribosomal protein L3 59.9954
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 51.0093
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 43.2755
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 40.2725
8 ENSG00000019582 CD74 CD74 molecule 32.3802
9 ENSG00000174748 RPL15 ribosomal protein L15 31.9581
10 ENSG00000149273 RPS3 ribosomal protein S3 31.9098

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285993 novel transcript, antisense to RNF165 -0.0907
58734 ENSG00000285992 novel transcript -0.0907
58733 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0907
58732 ENSG00000285989 TEC -0.0907
58731 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0907
58730 ENSG00000285987 NA -0.0907
58729 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0907
58728 ENSG00000285985 NA -0.0907
58727 ENSG00000285984 novel transcript -0.0907
58726 ENSG00000285982 novel protein -0.0907

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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