SHOGoiN Cell Transcriptome: GSM1977407

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977407


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8020000000000000000000-724Sequence Read ArchiveSRP067661SRP067661_T9Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeHematopoietic stem cell (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 92.2058
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.0132
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 80.6351
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 63.0983
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 51.3137
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 49.2198
7 ENSG00000019582 CD74 CD74 molecule 43.3140
8 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 35.9710
9 ENSG00000150991 UBC ubiquitin C 32.8713
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.2501

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000273966 NA -0.1079
57170 ENSG00000273964 NA -0.1079
57169 ENSG00000273962 IGKV2-40 immunoglobulin kappa variable 2-40 -0.1079
57168 ENSG00000273961 NA -0.1079
57166 ENSG00000273958 NA -0.1079
57165 ENSG00000273956 NA -0.1079
57162 ENSG00000273948 NA -0.1079
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.2501
9 ENSG00000150991 UBC ubiquitin C 32.8713
8 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 35.9710

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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