SHOGoiN Cell Transcriptome: GSM1977412

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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8020000000000000000000-711Sequence Read ArchiveSRP067661SRP067661_T14Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeGMP CFU-GM (granulocyte-monocyte progenitor, GMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 111.4629
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 97.8063
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 64.3370
4 ENSG00000100316 RPL3 ribosomal protein L3 46.7000
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 45.1443
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 44.5866
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 43.9953
8 ENSG00000075624 ACTB actin beta 40.1115
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.5486
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 35.0124

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0793
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0793
58733 ENSG00000285989 TEC -0.0793
58732 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0793
58731 ENSG00000285984 novel transcript -0.0793
58730 ENSG00000285982 novel protein -0.0793
58729 ENSG00000285981 NA -0.0793
58728 ENSG00000285975 Putative protein FAM90A7P -0.0793
58727 ENSG00000285972 CERNA2 competing endogenous lncRNA 2 for microRNA let-7b -0.0793
58726 ENSG00000285968 novel transcript -0.0793

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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