SHOGoiN Cell Transcriptome: GSM1977412

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977412


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8020000000000000000000-711Sequence Read ArchiveSRP067661SRP067661_T14Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeGMP CFU-GM (granulocyte-monocyte progenitor, GMP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 120.9572
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 79.1198
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 73.1817
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 54.0252
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 53.6220
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.6532
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.3452
8 ENSG00000150991 UBC ubiquitin C 35.5865
9 ENSG00000019582 CD74 CD74 molecule 32.3200
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.3496

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000270549 NA -0.0921
57170 ENSG00000270544 NA -0.0921
57169 ENSG00000270524 QTRT1P1 queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1 -0.0921
57168 ENSG00000270523 NA -0.0921
57167 ENSG00000270522 NA -0.0921
57166 ENSG00000270518 NA -0.0921
57165 ENSG00000270512 NA -0.0921
57164 ENSG00000270510 NA -0.0921
57163 ENSG00000270507 NA -0.0921
57162 ENSG00000270505 IGHV1OR15-1 immunoglobulin heavy variable 1/OR15-1 (non-functional) -0.0921

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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