SHOGoiN Cell Transcriptome: GSM1977414

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T16Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP-- CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 117.7772
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 94.0193
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.9652
4 ENSG00000100316 RPL3 ribosomal protein L3 57.3078
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 45.7520
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 43.4683
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.4949
8 ENSG00000137154 RPS6 ribosomal protein S6 30.8809
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.5908
10 ENSG00000174748 RPL15 ribosomal protein L15 30.2808

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57056 ENSG00000272247 novel transcript, antisense to MFSD1 -0.0717
57055 ENSG00000272243 novel transcript -0.0717
57054 ENSG00000272240 novel transcript, antisense to ZNF596 -0.0717
57053 ENSG00000272239 novel transcript, antisense to DPYSL3 -0.0717
57052 ENSG00000272236 novel transcript -0.0717
57051 ENSG00000272234 novel transcript, antisense to SEPP1 -0.0717
57050 ENSG00000272232 RN7SL726P RNA, 7SL, cytoplasmic 726, pseudogene -0.0717
57049 ENSG00000272220 ADP-ribosylation factor-like 17B (ARL17B) pseudogene -0.0717
57048 ENSG00000272218 novel transcript -0.0717
10 ENSG00000174748 RPL15 ribosomal protein L15 30.2808

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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