SHOGoiN Cell Transcriptome: GSM1977414

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


Profile download
8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T16Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP-- CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 115.7615
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 95.7846
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 82.4288
4 ENSG00000100316 RPL3 ribosomal protein L3 54.7001
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 46.3663
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 42.9074
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.3952
8 ENSG00000137154 RPS6 ribosomal protein S6 30.9517
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.4053
10 ENSG00000174748 RPL15 ribosomal protein L15 30.0322

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285993 novel transcript, antisense to RNF165 -0.0718
58734 ENSG00000285989 TEC -0.0718
58733 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0718
58732 ENSG00000285984 novel transcript -0.0718
58731 ENSG00000285982 novel protein -0.0718
58730 ENSG00000285981 NA -0.0718
58729 ENSG00000285977 novel transcript, antisense to CSMD1 -0.0718
58728 ENSG00000285976 Protein tyrosine phosphatase type IVA 1 -0.0718
58727 ENSG00000285975 Putative protein FAM90A7P -0.0718
58726 ENSG00000285968 novel transcript -0.0718

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...